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Message boards : News : [dna] started test run 'test_fixed_credit_medium'

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Travis Desell
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Joined: 16 Jan 12
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Message 5639 - Posted: 14 Jul 2015, 20:31:07 UTC

I've started a test run for DNA@Home using fixed credit. These should award ~44.47 credit. Let me know how these are running, and how the rate of credit is and I can do some tweaking. Once this have come back and are validating correctly (and awarding a decent amount of credit) I'll start up a large batch of runs.

Profile JumpinJohnny
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Message 5645 - Posted: 14 Jul 2015, 21:10:59 UTC - in response to Message 5639.

seems to go fine ... took 16 minutes, 26 seconds run time
stderr report looks "Normal" , I guess
<stderr_txt>
parsed argument '--motifs' successfully: forward,6 reverse,6 forward,6 reverse,6 forward,6 reverse,6
parsed argument '--enable_shifting' successfully: 2 5
parsed argument '--sequence_file' successfully: sequences.txt
parsed argument '--burn_in_period' successfully: 0
parsed argument '--sample_period' successfully: 10000
parsed argument '--max_sites' successfully: 7
parsed argument '--seed' successfully: 982906996
parsed argument '--print_best_sites' successfully: 0.1
parsed argument '--checkpoint_frequency' successfully: 10000
parsed argument '--blocks' successfully: 0.1 0.128571 0.128571 0.128571 0.128571 0.128571 0.128571 0.128571
reading from file input stream: ../../projects/csgrid.org_csg/wgEncodeOpenChromChipMcf7Pol2SerumstimRawDataRep1_deduplicated_snail_100_no_repeats.fa
Not using phylogeny.
background probabilities:
A:0.173482
C:0.326518
G:0.326518
T:0.173482
creating model from 'forward,6'
type_string: forward, motif_width: 6
creating model from 'reverse,6'
type_string: reverse, motif_width: 6
creating model from 'forward,6'
type_string: forward, motif_width: 6
creating model from 'reverse,6'
type_string: reverse, motif_width: 6
creating model from 'forward,6'
type_string: forward, motif_width: 6
creating model from 'reverse,6'
type_string: reverse, motif_width: 6
not starting from checkpoint
100 sequences with 100065 total base pairs.
doing walk: 0
seeding: 982906996
sampling initial sites uniform random
Zeroing accumulated samples.
Zeroing counts for motif models.
Incrementing intial counts for motifs.
burn in period: 0, sample period: 10000
17:06:10 (2348): called boinc_finish

</stderr_txt>

Travis Desell
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Joined: 16 Jan 12
Posts: 1813
Combined Credit: 23,514,257
DNA@Home: 293,563
SubsetSum@Home: 349,212
Wildlife@Home: 22,871,482
Wildlife@Home Watched: 212,926s
Wildlife@Home Events: 51
Climate Tweets: 21
Images Observed: 774

              
Message 5646 - Posted: 14 Jul 2015, 21:21:27 UTC - in response to Message 5645.

Does ~45 credit for these sound about right?

vlado101
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Joined: 28 Jan 15
Posts: 20
Combined Credit: 309,336
DNA@Home: 72,281
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Message 5650 - Posted: 15 Jul 2015, 16:08:31 UTC - in response to Message 5646.

Hi Travis,

I have completed 6 tasks for DNA@home and all of them gave me 44.47 credits.[/img]


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Message boards : News : [dna] started test run 'test_fixed_credit_medium'