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Travis Desell
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Message 5224 - Posted: 22 May 2015, 14:27:27 UTC

I've started up two new runs 'slug_hg19_1000fa_3motifs_6width_norepeats_1' and 'slug_hg19_1000fa_2motifs_6width_norepeats_1'. These should be on the order of 2x and 3x longer running than the current ones. Let me know if there are any problems.

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Message 5225 - Posted: 22 May 2015, 18:53:13 UTC

Perhaps this is the wrong thread to ask my newbie question: Found no answer yet.
I would like to run DNA WU's on a single core.
I need to have app_config.xml file in place to run limited numbers on my limited available cores.
Can't seem to figure out the name for the DNA file to plug into it.
I got the SSS file name figured out through trial and error but was wondering...

Citizen Science Grid
BOINC app names:
CSG -sss = subset_sum <<correct

CSG -dna = -??? 'slug_hg19' -???'gibbs_sampler' -???'dna_gibbs'??? -'dna_slug'???'gibbs'???

Is there some place we can get the BOINC filename on the server info or applications info pages?

Travis Desell
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Message 5226 - Posted: 22 May 2015, 19:37:41 UTC - in response to Message 5225.

Perhaps this is the wrong thread to ask my newbie question: Found no answer yet.
I would like to run DNA WU's on a single core.
I need to have app_config.xml file in place to run limited numbers on my limited available cores.
Can't seem to figure out the name for the DNA file to plug into it.
I got the SSS file name figured out through trial and error but was wondering...

Citizen Science Grid
BOINC app names:
CSG -sss = subset_sum <
CSG -dna = -??? 'slug_hg19' -???'gibbs_sampler' -???'dna_gibbs'??? -'dna_slug'???'gibbs'???

Is there some place we can get the BOINC filename on the server info or applications info pages?




Hi Johnny,

I can add these to the applications page. But at any rate the DNA@Home application will look something like Gibbs_VERSION_PLATFORM

--Travis

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Message 5227 - Posted: 22 May 2015, 20:44:13 UTC - in response to Message 5226.

OK
thanks, finally got one sent to me so I could see it and play with...

looks like the "boinc friendly" name for the purposes of .xml file is just "gibbs"

1st notice * " Your app_config.xml file refers to an unknown application 'slug_hg19'. Known applications: 'subset_sum' "
5th notice * "Your app_config.xml file refers to an unknown application 'gibbs_slug'. Known applications: 'subset_sum', 'gibbs' "
---------------------------------------
5/22/2015 4:28:03 PM | | Re-reading cc_config.xml
.........
5/22/2015 4:28:03 PM | Citizen Science Grid | Found app_config.xml
5/22/2015 4:28:03 PM | World Community Grid | Found app_config.xml
5/22/2015 4:28:08 PM | Citizen Science Grid | Sending scheduler request: To fetch work.
5/22/2015 4:28:08 PM | Citizen Science Grid | Requesting new tasks for CPU
5/22/2015 4:28:09 PM | Citizen Science Grid | Scheduler request completed: got 0 new tasks
5/22/2015 4:28:09 PM | Citizen Science Grid | No tasks sent
5/22/2015 4:28:09 PM | Citizen Science Grid | No tasks are available for DNA@Home Gibbs Sampler
5/22/2015 4:28:09 PM | Citizen Science Grid | No tasks are available for SubsetSum@Home Sum Calculator
5/22/2015 4:28:09 PM | Citizen Science Grid | This computer has reached a limit on tasks in progress
-------------------------------------

Sooo,, gibbs it is.

here is the app_config.xml I am using to dedicate one core to sss and one core to dna:

<app_config>
<app>
<name>subset_sum</name>
<max_concurrent>1</max_concurrent>
</app>
<app>
<name>gibbs</name>
<max_concurrent>1</max_concurrent>
</app>
</app_config>

not too certain if this filename info is necessary to put out there but it is handy.
it would require updating for each new project, Some have it available, most, I think do not.
thanks once again.

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Message 5228 - Posted: 22 May 2015, 22:49:15 UTC

If you have already downloaded some work units of each type then they will be shown in the Client_State.xml file in your Application/Boinc/ folder.

It lists the way the project needs the information to run a job.

So <app_name>gibbs</app_name>
and <file_name>Gibbs_0.48_windows_intelx86.exe</file_name>

With <app_name>subset_sum</app_name>
and <file_name>SubsetSum_0.16_windows.intelx86.exe</file_name>

Conan
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Message 5229 - Posted: 22 May 2015, 23:24:40 UTC - in response to Message 5228.
Last modified: 22 May 2015, 23:54:42 UTC

If you have already downloaded some work units of each type then they will be shown in the Client_State.xml file ......It lists the way the project needs the information to run a job......

Conan


Thanks Conan, So wait for the download and check the Client_State.
Newbie question. Thanks for info.
Still at the bottom of the learning curve.
JJ

**Now I see the names in server status column () also Project Status


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Message boards : News : [dna] two new runs