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Message boards : News : [dna] new run, cancelled erroring ones

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Travis Desell
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Message 4705 - Posted: 17 Oct 2014, 14:51:26 UTC

I started a new run 'test_hg19_100fa_2', and removed all the work units and tasks for 'test_hg19_100fa_1' and 'test_hg19_1000fa_1' because they were all erring out. Let me know if this new run is working.

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Message 4714 - Posted: 17 Oct 2014, 21:54:11 UTC

New tasks are running O.K.

These ones so far ( gibbs_test_hg19_100fa_2_117__ )
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Travis Desell
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Message 4717 - Posted: 17 Oct 2014, 23:13:10 UTC - in response to Message 4714.

Awesome!

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Message 4723 - Posted: 18 Oct 2014, 4:36:30 UTC
Last modified: 18 Oct 2014, 4:37:48 UTC

Travis.

Looks like I spoke to soon, still a problem.

Sat 18 Oct 2014 15:31:18 EST | Citizen Science Grid | Computation for task gibbs_test_hg19_1000fa_2_347_0_1 finished
Sat 18 Oct 2014 15:31:18 EST | Citizen Science Grid | Output file gibbs_test_hg19_1000fa_2_347_0_1_1 for task gibbs_test_hg19_1000fa_2_347_0_1 exceeds size limit.
Sat 18 Oct 2014 15:31:18 EST | Citizen Science Grid | File size: 8015669.000000 bytes. Limit: 5000000.000000 bytes

Aborting the rest, sorry to say.
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Message 4726 - Posted: 18 Oct 2014, 11:40:22 UTC - in response to Message 4705.

10/18/2014 12:26:31 AM | Citizen Science Grid | Starting task gibbs_test_hg19_1000fa_2_685_0_1
10/18/2014 1:14:04 AM | Citizen Science Grid | Computation for task gibbs_test_hg19_1000fa_2_697_0_1 finished
10/18/2014 1:14:04 AM | Citizen Science Grid | Output file gibbs_test_hg19_1000fa_2_697_0_1_1 for task gibbs_test_hg19_1000fa_2_697_0_1 exceeds size limit.
10/18/2014 1:14:04 AM | Citizen Science Grid | File size: 8025349.000000 bytes. Limit: 5000000.000000 bytes
10/18/2014 1:14:49 AM | Citizen Science Grid | Computation for task gibbs_test_hg19_1000fa_2_681_0_0 finished
10/18/2014 1:14:49 AM | Citizen Science Grid | Output file gibbs_test_hg19_1000fa_2_681_0_0_1 for task gibbs_test_hg19_1000fa_2_681_0_0 exceeds size limit.
10/18/2014 1:14:49 AM | Citizen Science Grid | File size: 8019701.000000 bytes. Limit: 5000000.000000 bytes
10/18/2014 1:51:40 AM | Citizen Science Grid | Computation for task gibbs_test_hg19_1000fa_2_685_0_1 finished
10/18/2014 1:51:40 AM | Citizen Science Grid | Output file gibbs_test_hg19_1000fa_2_685_0_1_1 for task gibbs_test_hg19_1000fa_2_685_0_1 exceeds size limit.
10/18/2014 1:51:40 AM | Citizen Science Grid | File size: 8020170.000000 bytes. Limit: 5000000.000000 bytes

Travis Desell
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Message 4727 - Posted: 18 Oct 2014, 14:01:59 UTC - in response to Message 4726.

These should be fixed. The 1000fa_2 should be all removed from the database and there should only be 1000fa_3 now, with correct size.

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Message 4729 - Posted: 18 Oct 2014, 15:05:56 UTC - in response to Message 4727.

The small and large ones are all running well now.
Slick as a greased pig.

Travis Desell
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Message 4730 - Posted: 18 Oct 2014, 15:51:05 UTC - in response to Message 4729.

The small and large ones are all running well now.
Slick as a greased pig.


Awesome! Really looking forward to these results coming in. We should be able to get some interesting biological information out of them, as well as do an analysis of how well the sampling method we're performing works!


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Message boards : News : [dna] new run, cancelled erroring ones